Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX257534: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-143836' containing sample 'Escherichia coli HVH 6 (3-8296502)'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.3M spots, 465.6M bases, 270.6Mb downloads

UUID: 8ae020b2-002b-4717-8958-0fc12f554afc

Design: jumping library

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186043 • SRP019587 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli HVH 6 (3-8296502)

SAMN01885673 • SRS402207 • All experiments • All runs

Organism: Escherichia coli HVH 6 (3-8296502)

Library:

Name: Solexa-143836

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 291702.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:3VYMZ

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30718

research_project: RP-192

root_sample_id: SM-2TCWV

sample_id: SM-3VYMZ

work_request: 35251

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-03-16 13:01:07.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.3M spots, 465.6M bases, 270.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR800540	2,304,936	465.6M	270.6Mb	2013-04-01

ID:: 360486

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